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Biology OMIM and Genbank
Biology Notes from lecture (Taken directly from from the syllabus)
Subject
Biology SL
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Level
IB
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High School - US
Academic year: 2019/2020
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Biology OMIM and Genbank
Subject: Biology SL
707 Documents
Students shared 707 documents in this course
Level:
IB
Was this document helpful?
Your name:
http://en.wikipedia.org/wiki/List_of_
human_genes
Gene notation (HUGO symbol:)
ABLIM3
Gene function:
Double zinc finger structure that promotes protein
protein interactions
Plays a role in embryonic development, cell lineage,
determination & cancer
http://www.omim.org/
Gene location in humans: 5q32
http://www.ncbi.nlm.nih.gov/genban
k/
Species 1: Humans, Homo sapiens
Base pairs in nucleotide sequence: 4452 bp
http://www.ncbi.nlm.nih.gov/genban
k/
Species 2: Alpaca,
Vicugna Pacos
Base pairs in nucleotide sequence: 2101 bp
http://www.ncbi.nlm.nih.gov/genban
k/
Species 3: House Mouse, Mus
musculus
Base pairs in nucleotide sequence: 4,177 bp
http://www.ncbi.nlm.nih.gov/genban
k/
Species 4: Brown rat, Rattus
norvegicus
Base pairs in nucleotide sequence: 2,833 bp
http://www.ncbi.nlm.nih.gov/genban
k/
Species 5: Fish (Blue Tilapia),
Oreochromis aureus
Base pairs in nucleotide sequence: 2,966 bp
Comparing base sequences - percent identity matrix:
http://www.ebi.ac.uk/Tools/msa/clustalo/
1: Homo Sapiens, humans 100.00 45.35 65.39 64.53 66.92
2: Xenopus Laevis, african clawed frogs 45.35 100.00 51.44 51.78 52.68
3: Sus,Pig 65.39 51.44 100.00 81.42 84.15
4: Canis familiaris, dogs 64.53 51.78 81.42 100.00 87.49
5: felis domesticus, cats 66.92 52.68 84.15 87.49 100.00
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